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page |
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Title and contents |
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1. |
Introduction |
1 |
1.1 |
Phospholipids in cellular signalling |
1 |
1.2 |
Mechanisms of regulation of phosphatidylcholine-specific phospholipase D |
3 |
1.3 |
Biochemistry of phosphatidylcholine-specific phospholipase D |
14 |
1.3.1 |
Catalysis |
14 |
1.3.2 |
Structure |
16 |
1.4 |
Cellular functions of phosphatidylcholine-specific phospholipase D |
18 |
1.4.1 |
Phosphatidic acid-derived diacylglycerol |
19 |
1.4.2 |
Protein targets of phosphatidic acid |
20 |
1.4.3 |
Vesicle transport |
20 |
1.4.4 |
Stress fibre formation |
21 |
1.5 |
Scope of this thesis |
23 |
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2. |
Results |
24 |
2.1 |
Tyrosine phosphorylation of phospholipase D1 |
24 |
2.2 |
Expression of phospholipase D and differentiation-associated genes in ceramide induced apoptosis in HaCaT keratinocytes |
27 |
2.3 |
Expression of phospholipase D and its stimulatory proteins in melanoma cells and primary cultured melanocytes |
30 |
2.4 |
Effect of phorbol ester and guanosine-5'-O-(3-thiotriphosphate) on phospholipase D in melanoma cells |
32 |
2.5 |
Effect of oleate on phospholipase D in melanoma cells |
36 |
2.6 |
Effect of pamidronate on melanoma cells |
37 |
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3. |
Discussion |
46 |
3.1 |
Effect of tyrosine phosphorylation on phospholipase D1 |
46 |
3.2 |
Expression of phospholipase D in ceramide-induced apoptosis |
48 |
3.3 |
Regulation of phospholipase D in melanoma cells and melanocytes |
50 |
3.4 |
Action of pamidronate on melanoma cells |
52 |
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4.1 |
Summary |
55 |
4.2 |
Zusammenfassung |
57 |
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5. |
Materials |
59 |
5.1 |
Reagents |
59 |
5.2 |
Cell culture materials |
60 |
5.3 |
Cell lines |
60 |
5.4 |
Antibodies |
61 |
5.5 |
Equipment |
62 |
5.6 |
Primer |
64 |
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6. |
Methods |
65 |
6.1 |
Cell culture |
65 |
6.1.1 |
Growth media and solutions |
65 |
6.1.2 |
Cultivation of cells |
66 |
6.1.3 |
Freezing and thawing of cells |
66 |
6.2 |
Lipid chemistry |
67 |
6.2.1 |
Preparation of substrate vesicles for the in vitro phospholipase D assay |
67 |
6.2.2 |
Identification and quantification of radioactively labelled lipids |
67 |
6.3 |
Enzyme reactions |
68 |
6.3.1 |
Assay of phospholipase D1 activity |
68 |
6.4 |
Protein chemistry |
69 |
6.4.1 |
Preparation of cell lysates and subcellular fractionation |
69 |
6.4.2 |
Determination of protein concentration |
69 |
6.4.3 |
Discontinuous sodium dodecyl sulphate-polyacrylamide gel electrophoresis |
70 |
6.5 |
Immunochemistry |
73 |
6.5.1 |
Purification of antibodies |
73 |
6.5.1.1 |
Preparation of affinity columns |
73 |
6.5.1.2 |
Affinity chromatography |
74 |
6.5.2 |
Denaturing immunoprecipitation |
75 |
6.5.3 |
Western blotting |
76 |
6.5.4 |
Immunodetection of blotted proteins |
77 |
6.5.5 |
Immunohistochemical detection using alkaline phosphatase anti alkaline phosphatase antibody (APAAP) complexes |
79 |
6.6 |
Molecular biology |
81 |
6.6.1 |
Isolation of total RNA |
81 |
6.6.2 |
Determination of nucleic acid concentration |
82 |
6.6.3 |
Synthesis of complementary DNA |
82 |
6.6.4 |
Polymerase chain reaction |
83 |
6.6.5 |
Agarose gel electrophoresis |
84 |
6.7 |
Cell biology |
85 |
6.7.1 |
Preparation of pervanadate |
85 |
6.7.2 |
Measurement of proliferation |
85 |
6.7.3 |
Determination of cytotoxicity |
86 |
6.7.4 |
Detection of apoptosis |
87 |
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7. |
References |
89 |
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8. |
List of publications |
108 |
8.1 |
Original publications |
108 |
8.2 |
Short publications |
108 |
8.3 |
Manuscripts |
109 |
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Curriculum vitae |
I |
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Acknowledgements |
II |