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Digitale Dissertation

Bernd Essigmann :
Sulfolipid in Arabidopsis thaliana
Biosynthesis, Regulation and Function
Sulfolipid in Arabidopsis thaliana

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Abstract

The sulfolipid sulfoquinovosyldiacylglycerol is found in almost all photosynthetic and few non-photosynthetic organisms. Studies on the biosynthesis and function of this unusual lipid were performed mostly in bacteria. In the present work the higher plant Arabidopsis thaliana was used as model organism. One part of this study focused on the biosynthesis of sulfolipid, in particular the formation of the sulfoquinovosyl-headgroup. Therefor a genetic approach was chosen. The SQD1 gene of Arabidopsis was expressed in E. coli and purified. The SQD1 protein was first characterized using a structural model and the results were proven biochemical. It was possible to identify NAD+ as cofactor and UDP-Glucose as substrate of SQD1. Crystallization and the resulting structure of SQD1confirmed the structural model and the biochemical characterization. Considering all these results a reaction mechanism for the SQD1 protein was proposed.

In the second part of this work the regulation and functions of sulfolipid in Arabidopsis were investigated. Under phosphate-limiting conditions drastic changes in the lipid composition as well as strong induction of SQD1 mRNA and SQD1 protein were observed. Furthermore the pho1 mutant of Arabidopsis was used for physiological experiments. In spite of dramatic changes in the lipid composition this mutant shows no changes in the light acclimation in comparison to the wild type.

It is suggested that adjustments of lipid composition of thylakoid membranes allow the cell to maintain the function of essential processes that are restricted to these membranes, such as photosynthesis. In particular a certain amount of anionic thylakoid lipid is maintained by substituting sulfolipid for phosphatidylglycerol under reduced phosphate availability.


Table of Contents

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Inhaltsverzeichnis

1

Einleitung

1

1.1

Lipide in der photosynthetischen Membran

2

1.2

Das Sulfolipid6

4
1.3 Molekulargenetischer Ansatz mit Modellorganismen 11
1.4 Kristallstruktur und Homologie Modelling 13

1.5

Zielsetzung

15

2

Material

16

2.1

Chemikalien und Enzyme

16

2.2

Bakterienstämme und Vektoren

16

2.3

Pflanzen

17

2.4

Medien

17

3

Methoden

18

3.1

Kultivierung von Pflanzen und Bakterien

18
3.2 DNA/RNA-Techniken 19
3.3 Transformation 22
3.4 Lipidanalyse 23
3.5 Proteinanalyse 24
3.6 Kristallstruktur 28
3.7 Computergestützte Datenbankvergleiche 29
3.8 Molecular Modelling 29
3.9 Quantitative NAD+ Bestimmung 31
3.10 HPLC-Analyse 31
3.11 Massenspektrometrie von NAD+ 32
3.12 NMR-Spektroskopie 32
4 Ergebnisse 33
4.1 Das SQD1 Gen 33
4.2 Homologiemodell von SQD1 37
4.3 Biochemische Charakterisierung von SQD1 44
4.4 Kristallstruktur von SQD1 52
4.5 Untersuchungen zur spezifischen Funktion von Sulfolipid inhöheren Pflanzen 55
4.6 Untersuchungen zur Rolle von Lipiden in der Photosynthese anhand der pho1 Mutante von Arabidopsis 62
5 Diskussion 66
5.1 Das SQD1 Protein 67
5.2 Funktion und Regulation von Sulfolipid 73
6 Zusammenfassung 78
Summary 79
7 Literatur 80
8 Anhang 92
8.1 Konstruktion transgener Pflanzen 92
8.2 Überexpression in Arabidopsis 93
8.3 Gen Knock-out in Arabidopsis 94

More Information:

Online available: http://www.diss.fu-berlin.de/1999/41/indexe.html
Language of PhDThesis: german
Keywords: plant; membrane lipids; photosynthesis; UDP-sulfoquinovose
DNB-Sachgruppe: 30 Chemie
Date of disputation: 10-Jun-99
PhDThesis from: Department Biologie, Chemie, Pharmazie, Freie Universität Berlin
First Referee: Prof. Dr. Volker A. Erdmann
Second Referee: Prof. Dr. Christoph Benning
Contact (Author): essigmann@mpimp-golm.mpg.de
Contact (Advisor): benning@pilot.msu.edu
Date created:18-Aug-99
Date available:18-Aug-99

 


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